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 Title
 A Bayesian MRF Framework for Labeling Terrain Using Hyperspectral Imaging.
 Creator

Neher, Robert E., Srivastava, Anuj, Liu, Xiuwen, Huffer, Fred, Wegkamp, Marten, Department of Statistics, Florida State University
 Abstract/Description

We explore the nonGaussianity of hyperspectral data and present probability models that capture variability of hyperspectral images. In particular, we present a nonparametric probability distribution that models the distribution of the hyperspectral data after reducing the dimension of the data via either principal components or Fisher's discriminant analysis. We also explore the directional differences in observed images and present two parametric distributions, the generalized Laplacian...
Show moreWe explore the nonGaussianity of hyperspectral data and present probability models that capture variability of hyperspectral images. In particular, we present a nonparametric probability distribution that models the distribution of the hyperspectral data after reducing the dimension of the data via either principal components or Fisher's discriminant analysis. We also explore the directional differences in observed images and present two parametric distributions, the generalized Laplacian and the Bessel K form, that well model the nonGaussian behavior of the directional differences. We then propose a model that labels each spatial site, using Bayesian inference and Markov random fields, that incorporates the information of the nonparametric distribution of the data, and the parametric distributions of the directional differences, along with a prior distribution that favors smooth labeling. We then test our model on actual hyperspectral data and present the results of our model, using the Washington D.C. Mall and Indian Springs rural area data sets.
Show less  Date Issued
 2004
 Identifier
 FSU_migr_etd2691
 Format
 Thesis
 Title
 High Level Image Analysis on Manifolds via Projective Shapes and 3D Reflection Shapes.
 Creator

Lester, David T. (David Thomas), Patrangenaru, Victor, Liu, Xiuwen, Barbu, Adrian G. (Adrian Gheorghe), Tao, Minjing, Florida State University, College of Arts and Sciences,...
Show moreLester, David T. (David Thomas), Patrangenaru, Victor, Liu, Xiuwen, Barbu, Adrian G. (Adrian Gheorghe), Tao, Minjing, Florida State University, College of Arts and Sciences, Department of Statistics
Show less  Abstract/Description

Shape analysis is a widely studied topic in modern Statistics with important applications in areas such as medical imaging. Here we focus on twosample hypothesis testing for both finite and infinite extrinsic mean shapes of configurations. First, we present a test for equality of mean projective shapes of 2D contours based on rotations. Secondly, we present a test for mean 3D reflection shapes based on the Schoenberg mean. We apply these tests to footprint data (contours), clamshells (3D...
Show moreShape analysis is a widely studied topic in modern Statistics with important applications in areas such as medical imaging. Here we focus on twosample hypothesis testing for both finite and infinite extrinsic mean shapes of configurations. First, we present a test for equality of mean projective shapes of 2D contours based on rotations. Secondly, we present a test for mean 3D reflection shapes based on the Schoenberg mean. We apply these tests to footprint data (contours), clamshells (3D reflection shape) and human facial configurations extracted from digital camera images. We also present the method of MANOVA on manifolds, and apply it to face data extracted from digital camera images. Finally, we present a new statistical tool called antiregression.
Show less  Date Issued
 2017
 Identifier
 FSU_2017SP_Lester_fsu_0071E_13856
 Format
 Thesis
 Title
 Nonparametric Data Analysis on Manifolds with Applications in Medical Imaging.
 Creator

Osborne, Daniel Eugene, Patrangenaru, Victor, Liu, Xiuwen, Barbu, Adrian, Chicken, Eric, Department of Statistics, Florida State University
 Abstract/Description

Over the past twenty years, there has been a rapid development in Nonparametric Statistical Analysis on Manifolds applied to Medical Imaging problems. In this body of work, we focus on two different medical imaging problems. The first problem corresponds to analyzing the CT scan data. In this context, we perform nonparametric analysis on the 3D data retrieved from CT scans of healthy young adults, on the SizeandReflection Shape Space of kads in general position in 3D. This work is a part...
Show moreOver the past twenty years, there has been a rapid development in Nonparametric Statistical Analysis on Manifolds applied to Medical Imaging problems. In this body of work, we focus on two different medical imaging problems. The first problem corresponds to analyzing the CT scan data. In this context, we perform nonparametric analysis on the 3D data retrieved from CT scans of healthy young adults, on the SizeandReflection Shape Space of kads in general position in 3D. This work is a part of larger project on planning reconstructive surgery in severe skull injuries which includes preprocessing and postprocessing steps of CT images. The next problem corresponds to analyzing MR diffusion tensor imaging data. Here, we develop a twosample procedure for testing the equality of the generalized Frobenius means of two independent populations on the space of symmetric positive matrices. These new methods, naturally lead to an analysis based on Cholesky decompositions of covariance matrices which helps to decrease computational time and does not increase dimensionality. The resulting nonparametric matrix valued statistics are used for testing if there is a difference on average between corresponding signals in Diffusion Tensor Images (DTI) in young children with dyslexia when compared to their clinically normal peers. The results presented here correspond to data that was previously used in the literature using parametric methods which also showed a significant difference.
Show less  Date Issued
 2012
 Identifier
 FSU_migr_etd5085
 Format
 Thesis
 Title
 Nonparametric Estimation of Three Dimensional Projective Shapes with Applications in Medical Imaging and in Pattern Recognition.
 Creator

Crane, Michael, Patrangenaru, Victor, Liu, Xiuwen, Huﬀer, Fred W., Sinha, Debajyoti, Department of Statistics, Florida State University
 Abstract/Description

This dissertation is on analysis of invariants of a 3D configuration from its 2D images in pictures of this configuration, without requiring any restriction on the camera positioning relative to the scene pictured. We briefly review some of the main results found in the literature. The methodology used is nonparametric, manifold based combined with standard computer vision reconstruction techniques. More specifically, we use asymptotic results for the extrinsic sample mean and the extrinsic...
Show moreThis dissertation is on analysis of invariants of a 3D configuration from its 2D images in pictures of this configuration, without requiring any restriction on the camera positioning relative to the scene pictured. We briefly review some of the main results found in the literature. The methodology used is nonparametric, manifold based combined with standard computer vision reconstruction techniques. More specifically, we use asymptotic results for the extrinsic sample mean and the extrinsic sample covariance to construct bootstrap confidence regions for mean projective shapes of 3D configurations. Chapters 4, 5 and 6 contain new results. In chapter 4, we develop tests for coplanarity. In chapter 5, is on reconstruction of 3D polyhedral scenes, including texture from arbitrary partial views. In chapter 6, we develop a nonparametric methodology for estimating the mean change for matched samples on a Lie group. We then notice that for k ≥ 4, a manifold of projective shapes of kads in general position in 3D has a structure of 3k − 15 dimensional Lie group (PQuaternions) that is equivariantly embedded in an Euclidean space, therefore testing for mean 3D projective shape change amounts to a one sample test for extrinsic mean PQuaternion Objects. The Lie group technique leads to a large sample and nonparametric bootstrap test for one population extrinsic mean on a projective shape space, as recently developed by Patrangenaru, Liu and Sughatadasa. On the other hand, in absence of occlusions, the 3D projective shape of a spatial configuration can be recovered from a stereo pair of images, thus allowing to test for mean glaucomatous 3D projective shape change detection from standard stereo pairs of eye images.
Show less  Date Issued
 2010
 Identifier
 FSU_migr_etd4607
 Format
 Thesis
 Title
 Nonparametric Estimation of Three Dimensional Projective Shapes with Applications in Medical Imaging and in Pattern Recognition.
 Creator

Crane, Michael, Patrangenaru, Victor, Liu, Xiuwen, Huﬀer, Fred W., Sinha, Debajyoti, Department of Statistics, Florida State University
 Abstract/Description

This dissertation is on analysis of invariants of a 3D configuration from its 2D images in pictures of this configuration, without requiring any restriction on the camera positioning relative to the scene pictured. We briefly review some of the main results found in the literature. The methodology used is nonparametric, manifold based combined with standard computer vision re construction techniques. More specifically, we use asymptotic results for the extrinsic sample mean and the extrinsic...
Show moreThis dissertation is on analysis of invariants of a 3D configuration from its 2D images in pictures of this configuration, without requiring any restriction on the camera positioning relative to the scene pictured. We briefly review some of the main results found in the literature. The methodology used is nonparametric, manifold based combined with standard computer vision re construction techniques. More specifically, we use asymptotic results for the extrinsic sample mean and the extrinsic sample covariance to construct boot strap confidence regions for mean projective shapes of 3D configurations. Chapters 4, 5 and 6 contain new results. In chapter 4, we develop tests for coplanarity. In chapter 5, is on reconstruction of 3D polyhedral scenes, including texture from arbitrary partial views. In chapter 6, we develop a nonparametric methodology for estimating the mean change for matched samples on a Lie group. We then notice that for k '' 4, a manifold of projective shapes of kads in general position in 3D has a structure of 3k and #8722; 15 dimensional Lie group (PQuaternions) that is equivariantly embedded in an Euclidean space, therefore testing for mean 3D projective shape change amounts to a one sample test for extrinsic mean PQuaternion Objects. The Lie group technique leads to a large sample and nonparametric bootstrap test for one population extrinsic mean on a projective shape space, as recently developed by Patrangenaru, Liu and Sughatadasa [1]. On the other hand, in absence of occlusions, the 3D projective shape of a spatial configuration can be recovered from a stereo pair of images, thus allowing to test for mean glaucomatous 3D projective shape change detection from standard stereo pairs of eye images.
Show less  Date Issued
 2010
 Identifier
 FSU_migr_etd7118
 Format
 Thesis
 Title
 The Oneand TwoSample Problem for Data on Hilbert Manifolds with Applications to Shape Analysis.
 Creator

Qiu, Mingfei, Patrangenaru, Victor, Liu, Xiuwen, Slate, Elizabeth H., Barbu, Adrian G. (Adrian Gheorghe), Clickner, Robert Paul, Paige, Robert, Florida State University, College...
Show moreQiu, Mingfei, Patrangenaru, Victor, Liu, Xiuwen, Slate, Elizabeth H., Barbu, Adrian G. (Adrian Gheorghe), Clickner, Robert Paul, Paige, Robert, Florida State University, College of Arts and Sciences, Department of Statistics
Show less  Abstract/Description

This dissertation is concerned with high level imaging analysis. In particular, our focus is on extracting the projective shape information or the similarity shape from digital camera images or Magnetic Resonance Imaging(MRI). The approach is statistical without making any assumptions about the distributions of the random object under investigation. The data is organized as points on a Hilbert manifold. In the case of projective shapes of finite dimensional configuration of points, we...
Show moreThis dissertation is concerned with high level imaging analysis. In particular, our focus is on extracting the projective shape information or the similarity shape from digital camera images or Magnetic Resonance Imaging(MRI). The approach is statistical without making any assumptions about the distributions of the random object under investigation. The data is organized as points on a Hilbert manifold. In the case of projective shapes of finite dimensional configuration of points, we consider testing a onesample null hypothesis, while in the infinite dimensional case, we considered a neighborhood hypothesis testing methods. For 3D scenes, we retrieve the 3D projective shape, and use the Lie group structure of the projective shape space. We test the equality of two extrinsic means, by introducing the mean projective shape change. For 2D MRI of midsections of Corpus Callosum contours, we use an automatic matching technique that is necessary in pursuing a onesample neighborhood hypothesis testing for the similarity shapes. We conclude that the mean similarity shape of the Corpus Callosum of average individuals is very far from the shape of Albert Einstein's, which may explain his geniality. Another application of our Hilbert manifold methodology is twosample testing problem for VeroneseWhitney means of projective shapes of 3D contours. Particularly, our data consisting comparing 3D projective shapes of contours of leaves from the same tree species.
Show less  Date Issued
 2015
 Identifier
 FSU_2015fall_Qiu_fsu_0071E_12922
 Format
 Thesis
 Title
 Optimal Linear Representations of Images under Diverse Criteria.
 Creator

Rubinshtein, Evgenia, Srivastava, Anuj, Liu, Xiuwen, Huﬀer, Fred, Chicken, Eric, Department of Statistics, Florida State University
 Abstract/Description

Image analysis often requires dimension reduction before statistical analysis, in order to apply sophisticated procedures. Motivated by eventual applications, a variety of criteria have been proposed: reconstruction error, class separation, nonGaussianity using kurtosis, sparseness, mutual information, recognition of objects, and their combinations. Although some criteria have analytical solutions, the remaining ones require numerical approaches. We present geometric tools for finding linear...
Show moreImage analysis often requires dimension reduction before statistical analysis, in order to apply sophisticated procedures. Motivated by eventual applications, a variety of criteria have been proposed: reconstruction error, class separation, nonGaussianity using kurtosis, sparseness, mutual information, recognition of objects, and their combinations. Although some criteria have analytical solutions, the remaining ones require numerical approaches. We present geometric tools for finding linear projections that optimize a given criterion for a given data set. The main idea is to formulate a problem of optimization on a Grassmann or a Stiefel manifold, and to use differential geometry of the underlying space to construct optimization algorithms. Purely deterministic updates lead to local solutions, and addition of random components allows for stochastic gradient searches that eventually lead to global solutions. We demonstrate these results using several image datasets, including natural images and facial images.
Show less  Date Issued
 2006
 Identifier
 FSU_migr_etd1926
 Format
 Thesis
 Title
 Statistical Analysis on Object Spaces with Applications.
 Creator

Yao, Kouadio David, Patrangenaru, Victor, Kercheval, Alec N., Liu, Xiuwen, Mio, Washington, Wang, Xiaoming, Florida State University, College of Arts and Sciences, Department of...
Show moreYao, Kouadio David, Patrangenaru, Victor, Kercheval, Alec N., Liu, Xiuwen, Mio, Washington, Wang, Xiaoming, Florida State University, College of Arts and Sciences, Department of Mathematics
Show less  Abstract/Description

Most of the data encountered is bounded nonlinear data. The Universe is bounded, planets are sphere like shaped objects, and life growing on Earth comes in various shapes and colors that can hardly be represented as points on a linear space, and even if the object space they sit on is embedded in a Euclidean space, their mean vector can not be represented as a point on that object space, except for the case when such space is convex. To address this misgiving, since the mean vector is the...
Show moreMost of the data encountered is bounded nonlinear data. The Universe is bounded, planets are sphere like shaped objects, and life growing on Earth comes in various shapes and colors that can hardly be represented as points on a linear space, and even if the object space they sit on is embedded in a Euclidean space, their mean vector can not be represented as a point on that object space, except for the case when such space is convex. To address this misgiving, since the mean vector is the minimizer of the expected square distance, following Fr\'echet (1948), on a compact metric space, one may consider both minimizers and maximizers of the expected square distance to a given point on the object space as mean, respectively {\bf antimean} of a given random point. Of all distances on a object space, one considers here the chord distance associated with an embedding of the object space, since for such distances one can give a necessary and sufficient condition for the existence of a unique Fr\'echet mean (respectively Fr\'echet antimean). For such distributions these location parameters are called extrinsic mean (respectively extrinsic antimean), and the corresponding sample statistics are consistent estimators of their population counterparts. Moreover one derives the limit distribution of such estimators around a mean located at a smooth extrinsic antimean. Extrinsic analysis is thus a general framework that allows one to run object data analysis on nonlinear object spaces that can be embedded in a numerical space. In particular one focuses on VeroneseWhitney (VW) means and antimeans of 3D projective shapes of configurations extracted from digital camera images. The 3D data extraction is greatly simplified by an RGB based algorithm followed by the FaugerasHartleyGuptaChen 3D reconstruction method. In particular one derives two sample tests for face analysis based on projective shapes, and more generally a MANOVA on manifolds method to be used in 3D projective shape analysis. The manifold based approach is also applicable to financial data analysis for exchange rates.
Show less  Date Issued
 2016
 Identifier
 FSU_FA2016_Yao_fsu_0071E_13605
 Format
 Thesis