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Chromatin structure profile data from DNS-seq

Title: Chromatin structure profile data from DNS-seq: Differential nuclease sensitivity mapping of four reference tissues of B73 maize ( L).
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Name(s): Turpin, Zachary M, author
Vera, Daniel L, author
Savadel, Savannah D, author
Lung, Pei-Yau, author
Wear, Emily E, author
Mickelson-Young, Leigh, author
Thompson, William F, author
Hanley-Bowdoin, Linda, author
Dennis, Jonathan H, author
Zhang, Jinfeng, author
Bass, Hank W, author
Type of Resource: text
Genre: Journal Article
Text
Date Issued: 2018-08-10
Physical Form: computer
online resource
Extent: 1 online resource
Language(s): English
Abstract/Description: Presented here are data from Next-Generation Sequencing of differential micrococcal nuclease digestions of formaldehyde-crosslinked chromatin in selected tissues of maize () inbred line B73. Supplemental materials include a wet-bench protocol for making DNS-seq libraries, the DNS-seq data processing pipeline for producing genome browser tracks. This report also includes the peak-calling pipeline using the iSeg algorithm to segment positive and negative peaks from the DNS-seq difference profiles. The data repository for the sequence data is the NCBI SRA, BioProject Accession 8.
Identifier: FSU_pmch_30175199 (IID), 10.1016/j.dib.2018.08.015 (DOI), PMC6117953 (PMCID), 30175199 (RID), 30175199 (EID), S2352-3409(18)30865-5 (PII)
Grant Number: R01 GM126558
Publication Note: This NIH-funded author manuscript originally appeared in PubMed Central at https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6117953.
Persistent Link to This Record: http://purl.flvc.org/fsu/fd/FSU_pmch_30175199
Host Institution: FSU
Is Part Of: Data in brief.
2352-3409
Issue: vol. 20

Choose the citation style.
Turpin, Z. M., Vera, D. L., Savadel, S. D., Lung, P. -Y., Wear, E. E., Mickelson-Young, L., … Bass, H. W. (2018). Chromatin structure profile data from DNS-seq: Differential nuclease sensitivity mapping of four reference tissues of B73 maize ( L). Data In Brief. Retrieved from http://purl.flvc.org/fsu/fd/FSU_pmch_30175199