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Bacterial community diversity of the deep-sea octocoral .

Title: Bacterial community diversity of the deep-sea octocoral .
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Name(s): Kellogg, Christina A, author
Ross, Steve W, author
Brooke, Sandra D, author
Type of Resource: text
Genre: Journal Article
Text
Date Issued: 2016-09-29
Physical Form: computer
online resource
Extent: 1 online resource
Language(s): English
Abstract/Description: Compared to tropical corals, much less is known about deep-sea coral biology and ecology. Although the microbial communities of some deep-sea corals have been described, this is the first study to characterize the bacterial community associated with the deep-sea octocoral, . Samples from five colonies of were collected from Baltimore Canyon (379-382 m depth) in the Atlantic Ocean off the east coast of the United States of America. DNA was extracted from the coral samples and 16S rRNA gene amplicons were pyrosequenced using V4-V5 primers. Three samples sequenced deeply (>4,000 sequences each) and were further analyzed. The dominant microbial phylum was Proteobacteria, but other major phyla included Firmicutes and Planctomycetes. A conserved community of bacterial taxa held in common across the three colonies was identified, comprising 68-90% of the total bacterial community depending on the coral individual. The bacterial community of does not appear to include the genus , which has been found previously to be the dominant bacterial associate in several temperate and tropical gorgonians. Inferred functionality suggests the possibility of nitrogen cycling by the core bacterial community.
Identifier: FSU_pmch_27703865 (IID), 10.7717/peerj.2529 (DOI), PMC5047221 (PMCID), 27703865 (RID), 27703865 (EID), 2529 (PII)
Keywords: Bacteria, Cold-water coral, Gorgonian, Microbiome, Submarine canyon
Publication Note: This NIH-funded author manuscript originally appeared in PubMed Central at https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5047221.
Persistent Link to This Record: http://purl.flvc.org/fsu/fd/FSU_pmch_27703865
Host Institution: FSU
Is Part Of: PeerJ.
2167-8359
Issue: vol. 4

Choose the citation style.
Kellogg, C. A., Ross, S. W., & Brooke, S. D. (2016). Bacterial community diversity of the deep-sea octocoral . Peerj. Retrieved from http://purl.flvc.org/fsu/fd/FSU_pmch_27703865